A list of resources that you may find useful.
(Disclaimer: I am not responsible for content on external sites. I checked them at the time of posting, but sites may change at any time.)
Cellular Respiration
Virtual Cell Animation Collection: animations on ATP synthase/proton gradient and the electron transport chain http://vcell.ndsu.edu/animations/home.htm
(Disclaimer: I am not responsible for content on external sites. I checked them at the time of posting, but sites may change at any time.)
Throughout the Class:
Crash Course videos by John Green
http://www.youtube.com/user/crashcourse
BBC Science & Nature--many interactive quizzes
http://www.bbc.co.uk/science/humanbody/
The College Board AP Biology course description:
http://apcentral.collegeboard.com/apc/public/repository/ap-biology-course-description.pdf
AP Biology Course Materials from MIT: Lectures, video and audio clips, and .pdf files used in biology classes at MIT
http://ocw.mit.edu/OcwWeb/hs/biology/biology/index.htm
The Biology Project from the University of AZ: Tutorials and practice problems
http://www.biology.arizona.edu/default.html
Discover Magazine: Interesting, readable, current articles in science.
http://discovermagazine.com/
Science Magazine: Current events, research papers, and commentaries.
http://www.sciencemag.org/magazine.dtl
Biology textbook companion site: quizzes, flashcards, glossary and links for each chapter.
http://www.brookscole.com/cgi-wadsworth/course_products_wp.pl?fid=M20b&product_isbn_issn=9780495557920&discipline_number=22
ThinkQuest: Thousands of student-created websites on a variety of topics.
http://www.thinkquest.org/pls/html/f?p=52300:30:1875256273022870::::P30_CATEGORY_ID:CPJ_LIFE_SCIENCE
Biology animations: cell membranes, transport, ATP synthesis, DNA/RNA
http://telstar.ote.cmu.edu/biology/animation/
Useful links and animations for AP Bio, listed by topic
http://www.synhoff.com/links.htm
Variety of animations of biology topics
http://www.sumanasinc.com/webcontent/animations/biology.html
Pearson Biology Place--background and quizzes on 12 required labs
http://www.phschool.com/science/biology_place/labbench/lab1/intro.html
Pearson Biology Place--animations and reviews on many AP biology topics
http://www.phschool.com/science/biology_place/biocoach/index.html
Independent and dependent variables--bizarre but accurate!
http://www.youtube.com/watch?v=DK9-B3beRc8&feature=related
The Variables song
http://www.youtube.com/watch?v=hwU3YL_SD70&feature=related
http://www.youtube.com/watch?v=Hxbz656Euyw&NR=1
PBL's--case studies in science by the University of Buffalo
http://ublib.buffalo.edu/libraries/projects/cases/ubcase.htm#AP
Online biology book
http://www.estrellamountain.edu/faculty/farabee/biobk/biobooktoc.html
Unit 1 Topics:
Chemistry/Macromolecules
Podcast on carbon and macromolecules
http://www.peevyhouse.com/apbio_podcast.html
Macromolecule animations
http://bcs.whfreeman.com/thelifewire/content/chp03/0302002.html
Pearson BioCoach: macromolecule animations and quizzes
http://www.phschool.com/science/biology_place/biocoach/bioprop/intro.html
AP Biology essays: Sample essays on biochemistry and scoring guide
http://apbio.biosci.uga.edu/exam/essays/msword/Essay_Questions/BioChem_Ques.doc
Biology song lyrics--sing "Building a Histidine" to your family, they'll love it!
http://faculty.washington.edu/crowther/Misc/Songs/MP3/his.mp3
Amino Acid song!
http://users.rcn.com/fvirzi/wateri.shtml
Cells
CellsAlive--many animations and live cameras
http://www.cellsalive.com/
Virtual Cell Animation Collection: Animations of cell structure and processes
http://vcell.ndsu.edu/animations/home.htm
John Kyrk: Collection of animations and tutorials on cell structure and functions
http://www.johnkyrk.com/CellIndex.html
Online Onion Root Tips--identifying stages of mitosis
http://www.biology.arizona.edu/cell_bio/activities/cell_cycle/cell_cycle.html
AP Biology essays: Sample essays on cell biology with scoring guides
http://apbio.biosci.uga.edu/exam/essays/msword/Essay_Questions/Cell_Ques.doc
also http://www.csun.edu/science/biology/AP_biology/cell.doc
Cell Structure and Function
http://www.phschool.com/science/biology_place/biocoach/cells/intro.html
CNS cell unit
http://www.nscsd.org/webpages/klinkinhoker/regents_living_envir.cfm?subpage=25444
H1N1 virus animation
http://www.xvivo.net/zirus-antivirotics-condensed/
Gene Control
The tryp operon:
http://bcs.whfreeman.com/thelifewire/content/chp13/1302002.html
http://highered.mcgraw-hill.com/sites/dl/free/0072835125/126997/animation28.html
The lac operon
http://www.sumanasinc.com/webcontent/animations/content/lacoperon.html
http://highered.mcgraw-hill.com/olc/dl/120080/bio27.swf
http://www.phschool.com/science/biology_place/biocoach/lacoperon/intro.html
See DNAi Controlling the Code at http://www.dnai.org/a/index.html
Animation of Control of Gene Expression at http://personal.cityu.edu.hk/~bhdingli/Animation%20of%20Control%20of%20Gene%20Expression%20in%20Eukaryotes.htm
Mosaicism:
http://tomastomas108.wordpress.com/2009/08/26/blashko-lines/
X-inactivation--Genetic disorder caused by X-inactivation when one mutated X chromosome is present:
http://www.conganat.org/seap/reuniones/almagro2000/casas/nidosg2.htm
http://mom_2_three_ip.tripod.com/index.html
Photosynthesis
Overview of photosynthesis with animations
http://www.phschool.com/science/biology_place/biocoach/photosynth/intro.html
Of course our buddy John Kyrk...
http://www.johnkyrk.com/photosynthesis.html
Animation of the Calvin cycle and its discovery
http://bcs.whfreeman.com/thelifewire/content/chp08/0802003.html
An electron transport chain song
http://faculty.washington.edu/crowther/Misc/Songs/comeon.shtml
http://faculty.washington.edu/crowther/Misc/Songs/MP3/comeondown.mp3
And the Photosynthesis Calypso...
http://faculty.washington.edu/crowther/Misc/Songs/photo.shtml
More songs...
http://www.davincipress.com/metabmelodiesphotosynth.html
Cellular Respiration
Virtual Cell Animation Collection: animations on ATP synthase/proton gradient and the electron transport chain http://vcell.ndsu.edu/animations/home.htm
Respiration self-quiz http://www.phschool.com/science/biology_place/biocoach/cellresp/intro.html
Cellular respiration Jeopardy http://www.quia.com/cb/18754.html?AP_rand=1177592166
McGraw Hill: overview of respiration http://highered.mcgraw-hill.com/classware/ala.do?isbn=0072464631&alaid=ala_661171#
Metabolic pathways interactive http://www.wisc-online.com/objects/MBY2604/MBY2604.swf
Aerobic and anaerobic interactive tutorial http://www.sp.uconn.edu/~terry/Common/respiration.html